Insertion junction: CLIP2.043300_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043300
Chromosome:chromosome 17
Location:1813114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709150 HTB30,HTB3,HTB28 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGGCCTCCAAGCTGAGCCGCTACAACAAGAAGCCCACCGTGACCTCC
Internal bar code:GCGGCTTTTTTGACAATCTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2497
LEAP-Seq percent confirming:86.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGATGAATGCGGCAGA
Suggested primer 2:GTTGGGTCAAACAACCGCTC