Insertion junction: CLIP2.043304_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043304
Chromosome:chromosome 2
Location:1780033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086650 SMC2,DIV35 (1 of 1) K06674 - structural maintenance of chromosome 2 (SMC2); Structural Maintenance of Chromosomes protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATATCATATGCAGCGCTATGCATTACCGAGTCCAATCCCTCCTCGGCG
Internal bar code:AAGCCACTAAATCGTTGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2465
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGTGAGTTGTACGCCT
Suggested primer 2:TGCGTGCATTTGCGGTTTAA