Insertion junction: CLIP2.043322_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043322
Chromosome:chromosome 2
Location:3363031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098150 XYK1 (1 of 1) 2.7.1.17 - Xylulokinase / Xylulose kinase; Xylulose kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCCGAGGCCTACCCCGACTGGCTGGCGCGGCAGGTGGGGATGAGGGC
Internal bar code:ATAGTTATTGATTGGAGTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1579
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAGGTCTCACCCAGTCGG
Suggested primer 2:GGATGGTGGTACAAGTGGGG