Insertion junction: CLIP2.043331_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043331
Chromosome:chromosome 14
Location:1868735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619854 ELG35 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTTCGCGTGCCGGCTTTGCAGCCCATGCCCACGCCCAGTGGTGTCCA
Internal bar code:AAGGAGCAAGAATTCGCGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1536
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCGCGTATACTCACCC
Suggested primer 2:TTCTCCTCCTCCTCCCCATG