Insertion junction: CLIP2.043335_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043335
Chromosome:chromosome 6
Location:7122351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297904 (1 of 1) K10863 - aprataxin [EC:3.-.-.-] (APTX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGCGATGAGGGGGCGGACAGCGGGCGGAGCGGGGGTGCGGGGCCAG
Internal bar code:AAAAATCGTTGGCCTTGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1266
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGCTTTTGCCTGCATG
Suggested primer 2:ACACTACGCCGTGACACATT