Insertion junction: CLIP2.043335_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043335
Chromosome:chromosome 6
Location:7122752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297904 (1 of 1) K10863 - aprataxin [EC:3.-.-.-] (APTX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCCTGCTGTAGCACTAGTGGCCGATCCCGCGATGCTGCTCTCACTAC
Internal bar code:AAAAATCGTTGGCCTTGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1918
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTACGCCGTGACACATT
Suggested primer 2:AAGGTGCTTTTGCCTGCATG