Insertion junction: CLIP2.043345_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043345
Chromosome:chromosome 13
Location:3554928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGACACGCAGCTGTGCGAGCTGGCGGCCGCGGGCGGCCTGAGCCCCC
Internal bar code:GGATTATCACTTTTGATTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACACACACACACACCAA
Suggested primer 2:TTCGCTGCTCCACTGGTG