Insertion junction: CLIP2.043347_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043347
Chromosome:chromosome 17
Location:4055912
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728650 FAP196 (1 of 2) PTHR13720//PTHR13720:SF14 - WD-40 REPEAT PROTEIN // WD REPEAT-CONTAINING PROTEIN 16; Flagellar Associated Protein 196 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTCCCCAACCGCGCTCGCCGGGCACAGCGGCGCCTTCCTGCTGAGTG
Internal bar code:TCGCGTGATAAAGCCAGTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1904
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCCCTGAACATGGACTG
Suggested primer 2:GCTACGCCCTACTCCAATCC