Insertion junction: CLIP2.043349_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043349
Chromosome:chromosome 17
Location:5512031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTCTCCAACGCCAACAGCTGAGTACGTGCCTTGCGCGGCAGGAACGC
Internal bar code:TTCAACGGTTTTAACAGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1633
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGGGCACGGAGATGAA
Suggested primer 2:CCGTAGAGGCTCTTTGGCAA