Insertion junction: CLIP2.043351_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043351
Chromosome:chromosome 16
Location:1341046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651801 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGGGTCCAGGGGCCAAACACACGCGTACGGCTGTCCGCGATGCGTTC
Internal bar code:GTAGGAGTATGTTAACCGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3505
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTAATGCTGCGCCCATG
Suggested primer 2:CGTAACTAGCGCACATGCAC