Insertion junction: CLIP2.043351_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043351
Chromosome:chromosome 16
Location:1341055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651801 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCAGGGGGAACAGGCGGTCTCGGCAAGTCCAAATTCTACCCGCTCCC
Internal bar code:AAAATGTAGAGGACTGGGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4885
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAACTAGCGCACATGCAC
Suggested primer 2:GAAGTAATGCTGCGCCCATG