Insertion junction: CLIP2.043354_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043354
Chromosome:chromosome 12
Location:5719376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532300 APG10,ATG10 Autophagy-related protein; (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTACGTAGTAGAAATGAACCTCAAACTCGCGAGTTCCTTCACCTATTC
Internal bar code:TTAGCGATTTGCGGGCCTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCCCGTAACGTTTTGTC
Suggested primer 2:GTTCTGCTGCTGCTAGGTGA