Insertion junction: CLIP2.043355_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043355
Chromosome:chromosome 6
Location:8335768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307400 CCR5,EEP4 (1 of 2) PTHR12121//PTHR12121:SF37 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // 2',5'-PHOSPHODIESTERASE 12; Exonuclease-Endonuclease-Phosphatase superfamily protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGCCTGCCTGCCTCCCTCTCCCGCTGTACCCAGCCTCCACCTGTGTA
Internal bar code:AGGCCATTCACTGGAATTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2785
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGGGGAATGCTGAAGG
Suggested primer 2:CGCTACTGTCACTGCACAGA