Insertion junction: CLIP2.043358_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043358
Chromosome:chromosome 12
Location:4581795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCCCTGTGCTCTTTACAGCCCCCAGGCTGCTCCCCCACACGCCGC
Internal bar code:CCTAGAAACGCCCCCTTCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2740
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCAGGAGTTCGCTTTGC
Suggested primer 2:CACGAATGTGGGCTTGTTGG