Insertion junction: CLIP2.043360_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043360
Chromosome:chromosome 10
Location:1517297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428720 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGGCATGTGCCGCGCACACACCTGCCTGACCAGCTCCGGATATGCCG
Internal bar code:TGCTGTGAGCTGATTCTCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACACACTAGCGCACCAG
Suggested primer 2:ACCGAATTCCCTCCAAGCTG