Insertion junction: CLIP2.043366_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043366
Chromosome:chromosome 12
Location:2564770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801381 (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCCCGCAGCGCAGCCACGCACCACTGGCGTAGGTCGCGCAGATTTG
Internal bar code:GGTTATCGAAACTTGAGTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CATACGCACGGCAGTTTAGC
Suggested primer 2:ACATCCACCCGACCAATCAC