Insertion junction: CLIP2.043376_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043376
Chromosome:chromosome 2
Location:5774260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116800 (1 of 1) PTHR12381:SF46 - SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCTCCCGCGCATACACACACCGCAGGCAAGTTCTTCTTCCGCGTG
Internal bar code:TTAAGTCATTTGCAGATAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:428
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCTTGCTGCGTTATTAC
Suggested primer 2:TGCATGGTGTCGAGAGCTTT