Insertion junction: CLIP2.043380_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043380
Chromosome:chromosome 8
Location:4017565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800955 (1 of 1) PF00400//PF13191 - WD domain, G-beta repeat (WD40) // AAA ATPase domain (AAA_16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAAGTTCCCCAAGTCACGAAGGGGGTTGAGGGCGTGTGGTGCTGGTG
Internal bar code:CTGTAGTATAGTTTTAATTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGACATCCAGACACAGGG
Suggested primer 2:TGCCACTCATGCGATGACAT