Insertion junction: CLIP2.043380_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043380
Chromosome:chromosome 8
Location:4017567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800955 (1 of 1) PF00400//PF13191 - WD domain, G-beta repeat (WD40) // AAA ATPase domain (AAA_16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGATGATGGGGTTTTTTTACTGGGCCGGGGCACACAACTCCCCCCCT
Internal bar code:CTGTAGTATAGTTTTAATTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:53
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCACTCATGCGATGACAT
Suggested primer 2:GGTGACATCCAGACACAGGG