Insertion junction: CLIP2.043381_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043381
Chromosome:chromosome 9
Location:5468224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGGGGCGGCGCAGGTGCGCACCGGCCGCGAGTGGATCCACGTGGACC
Internal bar code:ATAATATTTCGGGGCTATCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1461
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGTTCAAGATCCAGCAC
Suggested primer 2:TGATTGTGCTTGCCTTGTGC