Insertion junction: CLIP2.043387_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043387
Chromosome:chromosome 7
Location:788160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318000 (1 of 2) PTHR12847//PTHR12847:SF3 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // NECAP-LIKE PROTEIN CG9132 5'UTR
Cre07.g800772 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGAGGCTGGATCCACGTCCGGGCTCAACGGGCACGGGAGCGGCGGTG
Internal bar code:CGACCGAGAAAGACTTCTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1492
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGGTGAGCAAGGTTGGC
Suggested primer 2:TCACAAGCCAATCCCCACTC