Insertion junction: CLIP2.043390_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043390
Chromosome:chromosome 8
Location:1116086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362682 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGAAAACGCCACGGCTGTGTGGGTGACGCAAGAAGCTCAGCAGGCGA
Internal bar code:CAATAATTCGTATTCGTCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1524
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCGCAACCCAAGCTAT
Suggested primer 2:TCGAGAATTACCTCTGCGGC