Insertion junction: CLIP2.043395_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043395
Chromosome:chromosome 7
Location:1424368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACGATGTCCCACCGGCACGGGCCAGCCCCCGTCCGAACCAATCTCCC
Internal bar code:TGAGGACATATTTTAAACTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4483
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGATACCGTACTGCCGTC
Suggested primer 2:ACACAGATTGGACGGCATGT