Insertion junction: CLIP2.043400_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043400
Chromosome:chromosome 16
Location:4611245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670850 (1 of 1) PTHR22975:SF2 - ECHINUS SPLICE FORM 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGAGCATCTCGCTCAGCAGCTCTCGGCACTGCTTGGCGCGGCTCTC
Internal bar code:ATGTTAATTCGTCTATTTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTAACACACGCACGCACA
Suggested primer 2:CTCCTGGCTGATGTGCTCAA