Insertion junction: CLIP2.043401_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043401
Chromosome:chromosome 16
Location:6127974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677150 (1 of 2) 2.4.1.122 - Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCGTGTGCAACTGACTGTGCGACCGACGCAGCTCAGATGCCAGCTTT
Internal bar code:TCCGAATTAGATGCGTGCACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3545
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCACCGTAGTGTCTGC
Suggested primer 2:CAATAAACCGGATGCGGCTG