Insertion junction: CLIP2.043404_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043404
Chromosome:chromosome 9
Location:5949330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412175 (1 of 2) 3.7.1.8 - 2,6-dioxo-6-phenylhexa-3-enoate hydrolase / HOHPDA hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCTGCCGCCGCGCTTGTGCTTGCGGCGGCATCGCGGCGGCAGTAGCA
Internal bar code:ACGGTCAATCCCTAGAAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2474
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACCTTACTTCCGTTGCC
Suggested primer 2:TAAGTGTAGATGCCGCGGTC