Insertion junction: CLIP2.043405_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043405
Chromosome:chromosome 17
Location:3949795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728100 (1 of 1) 3.5.1.14 - N-acyl-aliphatic-L-amino acid amidohydrolase / N-acyl-L-amino-acid amidohydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTACGGTACCCAGGGTTGGGGTTCATTCCGGAACCCAAGGAAAACCAG
Internal bar code:AAGAAAGGCCTGAACAAGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1309
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACGTTTGGCAGTTGAT
Suggested primer 2:TTCAAAGGAGGTCAGCGCAT