Insertion junction: CLIP2.043422_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043422
Chromosome:chromosome 16
Location:6506856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674650 (1 of 1) 3.5.1.59 - N-carbamoylsarcosine amidase / N-carbamoylsarcosine amidohydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCATCCTGGCGTGCCAGGACGGAGTTGGGCAGCGTAAATCTTGTTAAA
Internal bar code:TATCGTTGACGTTCGTGGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1161
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAATGCTCGAGGTTCCCC
Suggested primer 2:TGTTCACGGTTACCTGGAGC