Insertion junction: CLIP2.043424_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043424
Chromosome:chromosome 2
Location:4247804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104500 CDJ4 (1 of 2) IPR001080 - 3Fe-4S ferredoxin; Chloroplast DnaJ-like protein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCCGCCCCAGGCCCGCCCAGTCGCCCACCTGCACGTCCTCCACGGAG
Internal bar code:TGGAGGTAGGTATGCGCACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2003
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATCTATGCGGTGGGTGG
Suggested primer 2:CCACCTTGTCGTTTGGAGGA