Insertion junction: CLIP2.043425_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043425
Chromosome:chromosome 3
Location:3974591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171424 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTCCTGCCACACTCGCACTGAGCCTGCCGCCCAGACCCCGCGGAGC
Internal bar code:GTCTGCAGTTATCGTGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1213
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCCTGTTCGACCAGATG
Suggested primer 2:CCAAAACAGTGACAGCGCTC