Insertion junction: CLIP2.043430_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043430
Chromosome:chromosome 2
Location:1991105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088250 MCT2 Malonyl-CoA:acyl-carrier-protein transacylase; (1 of 2) K00645 - [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] (fabD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGACCCCTCGACGCCTTGCCCCCAACTCAAAAGTATTATCGCTTGC
Internal bar code:AAGCCGTTGAGTAAAAAGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGTGTGTAGAGAGCTCA
Suggested primer 2:CTCCATCCAGTGTGCCATGT