Insertion junction: CLIP2.043431_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043431
Chromosome:chromosome 9
Location:1620130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398650 (1 of 1) PTHR21737:SF4 - CACTIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACATTTCCATCTGCTCTGTCCTGGCCGTTGCTGGCTAGCCCGCCTTG
Internal bar code:TATATAGGGATCCATGCAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:20.6897
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAACTTGGAGATGGGTG
Suggested primer 2:CCGCGCTGAAAATGATCAGG