Insertion junction: CLIP2.043431_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043431
Chromosome:chromosome 9
Location:1620131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398650 (1 of 1) PTHR21737:SF4 - CACTIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTGTGATAAATGTGGTAGGCATCCACCAAGGGAAGCCGCACAAAAC
Internal bar code:TATATAGGGATCCATGCAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1238
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGCTGAAAATGATCAGG
Suggested primer 2:GGGGAACTTGGAGATGGGTG