Insertion junction: CLIP2.043444_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043444
Chromosome:chromosome 1
Location:7751931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054600 (1 of 8) IPR000157 - Toll/interleukin-1 receptor homology (TIR) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGTGTTGATTGCAGGTGGAGGCCATTCCCTATCGCATGCATCCGCAC
Internal bar code:CGTTACGGATGTTCAATTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1605
LEAP-Seq percent confirming:6.45161
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGACAGAGGCTTTGGCG
Suggested primer 2:TAGCTGCACCACTGTTGAGG