Insertion junction: CLIP2.043444_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043444
Chromosome:chromosome 1
Location:7751940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054600 (1 of 8) IPR000157 - Toll/interleukin-1 receptor homology (TIR) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCGCACCTTCAGGCCTTTGCAAAGCGCATTCAGGTGCGGCACACCA
Internal bar code:CGTTACGGATGTTCAATTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1758
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGCACCACTGTTGAGG
Suggested primer 2:TACTGACAGAGGCTTTGGCG