Insertion junction: CLIP2.043449_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043449
Chromosome:chromosome 9
Location:1821809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397900 (1 of 1) PTHR21347:SF0 - CLEFT LIP AND PALATE TRANSMEMBRANE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAACCGACACTGACACACCACCCCACGAGGCCACGACCCCATCCCCA
Internal bar code:CTCTTGGTGGATTGCGGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGGACCAAACCCATACA
Suggested primer 2:CCAACGTGTGCAGTCCAAAG