Insertion junction: CLIP2.043449_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043449
Chromosome:chromosome 9
Location:1821813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397900 (1 of 1) PTHR21347:SF0 - CLEFT LIP AND PALATE TRANSMEMBRANE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCGGTGGTGGTGGGATGATGGTGAGGTCGTTTGGTGCAACTCAGGAA
Internal bar code:GTTAGGGGCGAGGTGCGCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3466
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGTGTGCAGTCCAAAG
Suggested primer 2:GCGAGGACCAAACCCATACA