Insertion junction: CLIP2.043457_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043457
Chromosome:chromosome 11
Location:4098306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481104 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGGGGCCGTGTCCATCACATGCCTGCAAGCGCGCGGGTGACCTGTCT
Internal bar code:GACCACTGCTAGGCAGCATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1257
LEAP-Seq percent confirming:65.5172
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGTGGAGAATAAGGGGG
Suggested primer 2:ATGGCCATGATCAAGGTGGG