Insertion junction: CLIP2.043460_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043460
Chromosome:chromosome 2
Location:3641561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041612

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCAAAATTACGCTGCCACCGAGAGCTCTCAGGGCATTTATGTGTATG
Internal bar code:CAGGCTTAACTAATGCCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2500
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGCTCTGGGATTGTGG
Suggested primer 2:CAACATGCACCGCGATACTG