Insertion junction: CLIP2.043463_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043463
Chromosome:chromosome 17
Location:5424934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738632 RLS13 RegA/RlsA-like protein; (1 of 10) IPR010919 - SAND domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATCCGTCCAGCCAGTCACTGCCGCTGCCCCTCCTGCCCCTCCTCCTG
Internal bar code:ATCGTAGTGCTGTGGGTGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1104
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCATCACCGTCCTGATCG
Suggested primer 2:GTGCATAGAGTACGACGGGG