Insertion junction: CLIP2.043464_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043464
Chromosome:chromosome 13
Location:2448542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGATGCATTGTTAGTGTTGTGTTGATGTGTGGGTTTGAGCCGCCCA
Internal bar code:TTGAGCATGGGGGACAAGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:65.2174
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTTGGAGGGGAGGTTGG
Suggested primer 2:ACAGGATGCACTGAACTGGG