Insertion junction: CLIP2.043467_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043467
Chromosome:chromosome 9
Location:2694874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391753 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGCCCCCCTCGCGCTCGCTGTCGGCGCCGCTAGAGGGCACTGCCGCC
Internal bar code:CGGGATTCACCGCTACGATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTGGAGCACGAGTTATA
Suggested primer 2:GACATGGATGCGCCCAATTC