Insertion junction: CLIP2.043477_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043477
Chromosome:chromosome 16
Location:7006061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673281 (1 of 1) K00477 - phytanoyl-CoA hydroxylase (PHYH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTATCCAAGATGAAGCCACGATTGGCATGACCGGGTGGTAAGTCCAC
Internal bar code:AATATTGGAGCTGAGAATCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2390
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGCTGCTCCAAGACTT
Suggested primer 2:CGCACGTAGAGAGCCTAGTG