Insertion junction: CLIP2.043485_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043485
Chromosome:chromosome 16
Location:1756692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654950 SRR3 Scavenger receptor cysteine rich (SRCR) protein; (1 of 18) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGTCGACAGCTCCTGCGTCCGTTGACGCGGCGGCCGGGTAGCCGG
Internal bar code:CTGCACATAGTGGAGCCTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5456
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGACCGGCTCCTATACC
Suggested primer 2:CAGGAAGGTGTTGCTTGCAC