Insertion junction: CLIP2.043487_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043487
Chromosome:chromosome 14
Location:2636988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625350 MAE17 MATE efflux family protein; (1 of 3) PTHR11206:SF95 - MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATTCCCCCCTCCCCACACACGCGTTCCCGGGAAGTGTGCCTGGTGCC
Internal bar code:ACCCGAGATTGATTAAGTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGGTTTTGCGATCGGCT
Suggested primer 2:TGCATTCCGCTTCACAGCTA