Insertion junction: CLIP2.043488_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043488
Chromosome:chromosome 11
Location:544236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467601 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCTTCAATGTCATCAACGAGAACAACGTGGAGGTGGAGATCAAGGA
Internal bar code:TTAACACAGGCGGTCTTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:23.4375
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGCAGCAATCAATTCGG
Suggested primer 2:CGGTATGTACGCGGCTTTTG