Insertion junction: CLIP2.043492_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043492
Chromosome:chromosome 2
Location:8585853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141000 DCL1 Dicer-like protein; (1 of 1) K11592 - endoribonuclease Dicer (DICER1, DCR1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCATACATTGGAGTGGTCCAGCCAGCAAGAGTATGCTGATAGATGTT
Internal bar code:CCAGGTGTCAATGTGGGTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTGACAATGGAGCGACT
Suggested primer 2:ACGCCGAAGTAGCTCACAAA