Insertion junction: CLIP2.043494_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043494
Chromosome:chromosome 8
Location:1395804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364250 (1 of 1) PF09174 - Maf1 regulator (Maf1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCCCCCGGAGGGCTGGATGCGTGCGGGAGGAGGAAGGGAAACTCGA
Internal bar code:CAACTGTTCAACTCGTTTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1130
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCGTCCTGGTTGTAGC
Suggested primer 2:ATGAGATGGTGGCCTCTCCT