Insertion junction: CLIP2.043502_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043502
Chromosome:chromosome 6
Location:3127691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275500 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGTTAAAGGAATGGGCGTTACGGCGCTGGTCGGGCGTCGACGCCGC
Internal bar code:GCCCTTTAGCTCAAAGATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGAGAGCAACAGCACT
Suggested primer 2:GCACAACGCACTAAAACCGT