Insertion junction: CLIP2.043503_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043503
Chromosome:chromosome 9
Location:4869223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402997 YBEH (1 of 3) 3.1.3.23 - Sugar-phosphatase; Putative rRNA processing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCCCACCCACTCACCCACCCGCAGCCACTCGCTGCACGACGAGTGCC
Internal bar code:ACCACTTGCCTAAGCATACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGTTTGTGCGACAGC
Suggested primer 2:CGCTCCTTACACCACACACT